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File Server Migration Wizard not copying NTFS permissions properly?

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I'm using the File Server Migration Toolkit 1.2 x64 to migrate file shares from an old Server 2008 R2 server to a new Server 2012 R2 server.  Both servers are still active AD DCs in the same domain.

When I use the File Server Migration Wizard with "Copy Security Settings" checked, it is copying Domain Users/Domain Admins/etc permissions, but not if an individual user was granted access to a folder.  The SID should be the same since it's all a single domain, and checking or unchecking "resolve invalid security descriptors" does not make a difference so I cant imagine its pruning them as invalid.

The tool is not reporting any errors, and all the files themselves are coming over just fine.

Ideas?


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